Differentiation is by limiting gene transcription and expression of a cell which defines a cell’s function.
Other functions apart from prescribed function are eliminated or not expressed. Each differentiated region has separate function and specialized materials present in them.
For example: Mesophyll cells in leaf has 40 – 50 chlorophyll, 106 photoreceptors, chlorophyll a and b, enzyme essential for photosynthesis namely RUBISCO – Ribulose 1,5 – bisphosphate carboxylase/oxygenase.
Similarly in root cell, lacks chlorophyl, photoreceptors proteins of chlorophyll instead they carry starch storing plastids namely amyloplast. Both leaf and root contain same genomic DNA but expression of gene and other activities determines the part which the cell must occupy.
The mechanisms are monitored by 3 types of gene namely:
1. Housekeeping genes
2. Cell or tissue specific genes
3. Regulatory genes
Housekeeping genes are common genes which are widely present at any part of the body doing respiratory, storage sugar uptake, protein synthesis etc.,
Cell or tissue specific genes are present in all types of cells or tissue but gene expression is limited to a cell type or tissue.
For example:
a. Chlorophyll proteins, photoreceptors, RUBISCO enzyme are present only in the mesenchymal cells.
b. Amyloplast are present only in roots for storage purpose in parenchymal cells
c. PHENYLALANINEAMMONIA LYSE gene is present in seed. The enzyme encoding gene helps in lignin synthesis in xylem.
Regulatory genes, synthesis proteins involved in signaling. These are encoded by multigene complexes known as Homeobox genes which are specified in determining the pattern for future differentiation.
For example: Plant Homeobox genes determine the patterning of the future structure, determination of cell fate, defining boundaries between different tissues and organs.
KNOX I genes are specified for patterning shoot meristem and differentiates them from lateral organs by not expressing them in lateral part of the plant.
As a whole differential gene expression and inhibition combinedly forms differentiated parts of the tissue or plants.